Allen Institute for Neural Dynamics
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aind-data-schema
aind-data-schema PublicA library that defines AIND data schema and validates JSON.
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aind-ephys-pipeline
aind-ephys-pipeline PublicAIND pipeline for processing extracellular electrophysiology data
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openscope-community-predictive-processing
openscope-community-predictive-processing PublicThis repository serves as a hub for community-driven contributions, documentation, and project tracking of the OpenScope Predictive Processing Community project.
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aind-ephys-spikesort-kilosort25-full
aind-ephys-spikesort-kilosort25-full PublicCodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.
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supervoxel-loss
supervoxel-loss PublicEfficient connectivity-preserving loss function for training neural networks to perform instance segmentation.
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ibl-ephys-alignment-gui
ibl-ephys-alignment-gui PublicForked from int-brain-lab/iblapps
Tool for aligning electrophysiological features to anatomical landmarks
Repositories
- aind-disentangled-rnns Public Forked from google-deepmind/disentangled_rnns
Cognitive Model Discovery via Disentangled RNNs (forked from google-deepmind)
AllenNeuralDynamics/aind-disentangled-rnns’s past year of commit activity - neuron-fragment-extractor Public
Python-based tool designed to generate training data for machine learning models used in automated correction of split mistakes in neuron segmentations.
AllenNeuralDynamics/neuron-fragment-extractor’s past year of commit activity - harp.device.cuttlefish Public
an octal, TTL input/output device with programmable square wave output.
AllenNeuralDynamics/harp.device.cuttlefish’s past year of commit activity - Rhapso Public
An open-source Python toolkit for large-scale fluorescence microscopy data alignment and fusion.
AllenNeuralDynamics/Rhapso’s past year of commit activity - openscope-params Public
AllenNeuralDynamics/openscope-params’s past year of commit activity - aind-vr-foraging-primary-data-nwb-packaging Public
Capsule that packages primary data for VR Foraging task using data contract
AllenNeuralDynamics/aind-vr-foraging-primary-data-nwb-packaging’s past year of commit activity - ibl-ephys-alignment-gui Public Forked from int-brain-lab/iblapps
Tool for aligning electrophysiological features to anatomical landmarks
AllenNeuralDynamics/ibl-ephys-alignment-gui’s past year of commit activity
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