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Docs: RF3 README update and moving RF3 examples#216

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rclune merged 4 commits intoproductionfrom
docs-rac-rf3-updates
Feb 27, 2026
Merged

Docs: RF3 README update and moving RF3 examples#216
rclune merged 4 commits intoproductionfrom
docs-rac-rf3-updates

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@rclune rclune commented Feb 17, 2026

I updated the RF3 README for installation instructions that matched the RFD3 installation instructions. For the first example, I improve the instructions for running and fixed the output file descriptions to match what is now output by running the example. I commented out the 'Templating a Small Molecule' section because many of the files in that section were not present in the repository. The rest of the changes were mostly typo fixes.

I moved the examples from foundry/docs/releases to foundry/models/rf3/docs to match the organization of RFD3. The changes made to the JSON files just reflect this change of location.

I updated the RF3 README for installation instructions that matched the RFD3 installation instructions. For the first example, I improve the instructions for running and fixed the output file descriptions to match what is now output by running the example. I commented out the 'Templating a Small Molecule' section because many of the files in that section were not present in the repository. The rest of the changes were mostly typo fixes.

 I moved the examples from `foundry/docs/releases` to `foundry/models/rf3/docs` to match the organization of RFD3. The changes made to the JSON files just reflect this change of location.
@rclune rclune changed the title RF3 README update and moving RF3 examples Docs: RF3 README update and moving RF3 examples Feb 17, 2026
@rclune rclune requested a review from woodsh17 February 25, 2026 22:36
> [!NOTE]
> **Pairwise Contact Support**: The model was trained with random pairwise contacts; our inference API could be further extended to support specification of individual (token-level) pairwise contacts in the future. Please let us know if this would be helpful for your usecase and we can prioritize appropriately.

<!-- THE BELOW WAS COMMENTED OUT DUE TO MISSING FILES
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Is there someone we should reach out to about this section?

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LGTM!

@rclune rclune merged commit 38d0989 into production Feb 27, 2026
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@rclune rclune deleted the docs-rac-rf3-updates branch February 27, 2026 23:35
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2 participants