docs: DataJoint 2.2 — Instance API & Thread-Safe Mode#154
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dimitri-yatsenko wants to merge 10 commits intomainfrom
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docs: DataJoint 2.2 — Instance API & Thread-Safe Mode#154dimitri-yatsenko wants to merge 10 commits intomainfrom
dimitri-yatsenko wants to merge 10 commits intomainfrom
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New pages: - explanation/whats-new-22.md: What's New in 2.2 overview - how-to/use-instances.md: Task-oriented guide for dj.Instance - reference/specs/thread-safe-mode.md: Thread-safe mode specification - tutorials/advanced/instances.ipynb: Step-by-step Instance tutorial Updated pages: - reference/configuration.md: Instance API and thread-safe mode sections - how-to/configure-database.md: Instance-based connections section - tutorials/basics/01-first-pipeline.ipynb: Instance alternative note - mkdocs.yaml: Bump version to 2.2, add nav entries Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
- Publishing workflow now checks out datajoint-python at pre/v2.2 instead of master (until merged) - EXECUTE_PG mode sets DJ_HOST=postgres (correct Docker service name) - Added zarr, matplotlib, faker to pip install for notebook execution Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Lychee linkcheck runs against source files, not built site URLs. Links to notebooks need the .ipynb extension to be resolvable. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
The 06-object-storage tutorial fails because datajoint.json configures a local store at /tmp/datajoint-tutorials which doesn't exist in the Docker container. Create it before executing notebooks. Also add minio as a dependency so it's ready if needed. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Add backend parameter to the Instance API table, document default ports per backend, and show usage examples for MySQL, PostgreSQL, and custom port configurations. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
All 23/23 notebooks pass against PostgreSQL. Updated execution outputs with current timestamps and connection info. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Replace relative date strings ('-35y', '-4y') and date_of_birth() with
fixed date() bounds so that Faker generates identical dates regardless
of when the notebook is executed.
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
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Summary
dj.InstanceAPI and thread-safe mode (DJ_THREAD_SAFE=true)backendparameter for MySQL/PostgreSQL selectionpre/v2.2branchNew pages
explanation/whats-new-22.md) — Feature overview and rationalehow-to/use-instances.md) — Task-oriented guidereference/specs/thread-safe-mode.md) — Architecture, config flow, global state audittutorials/advanced/instances.ipynb) — Step-by-step notebookUpdated pages
pre/v2.2Test plan
MODE=EXECUTE_PG)instances.ipynbtutorial executes correctly06-object-storage.ipynbpasses (minio + store directory fix)🤖 Generated with Claude Code