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Merged
StuartWheater merged 215 commits into from
Feb 10, 2026
Merged

V6.4.0 dev #445

StuartWheater merged 215 commits into from
Feb 10, 2026

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@StuartWheater StuartWheater commented Nov 28, 2025

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StuartWheater and others added 30 commits July 13, 2025 22:58
@StuartWheater
Initial fixes due to update
220d586
@StuartWheater
Merge branch 'v6.4.0-dev' of github.com:StuartWheater/dsBase into v6.…
e8840ac 
…4.0-dev
@villegar
Add file with key citations for DataSHIELD
09466bb
@villegar
Update DESCRIPTION to include reference to the citations
654e914
@StuartWheater
Update documents
b9ef5ac
@StuartWheater
Added 'cran-comments'
4babeed
@villegar
Add missing bibentry to auto-link the R package citation
89f9256
@villegar
Merge pull request datashield#398 from villegar/v6.3.3-dev
f9330a0 
Addresses CRAN feedback for submission
@StuartWheater
Merge branch 'datashield:v6.3.3-dev' into v6.3.3-dev
0ab1039
@StuartWheater
Update documentation and .Rbuildignore: StuartWheater/v6.3.3-dev
a1f9b2e
@OllyButters
Added authors and orcids
f8e19f3
@OllyButters
Title: Site -> Side
c17fa3a
@villegar
Skip these tests on Apple M1 architecture, unresolved issue
918477c
@StuartWheater
Merge pull request datashield#400 from OllyButters/v6.3.3-dev
f02e492 
V6.3.3 dev -DESC:  added authors + orcids
@StuartWheater
Update version
f2f1231
@villegar
Add CRAN release badge, title, installation instructions and references
a1f1178
@villegar
Correct title and citation for main package
5582620
@villegar
Add new workflow based on old azure-pipelines.yml file
c5088ce
@villegar
Update token variable name
1a24b75
@villegar
Replace test_package call by test_local
74a120b
@villegar
Use r-lib custom actions to setup deployment environment and customis…
408a736 
…e the location of logs
@villegar
Install missing package to run checks and tests
06daac3
@villegar
Add missing environment variable
4ead1cf
@villegar
Add step with new approach to install devtools
a4f0077
@villegar
Add missing workind directory
d66c37a
@villegar
Simplify workflow removing unnecessary step
a8269e5
@villegar
Remove additional double quote mark
f489302
@villegar
Ammend wrong file path and add commands to check current file tree
7a81c04
@villegar
Replace the location of testStatus for development purposes
a21b0c4
@villegar
Update path ../logs >>> logs
f5ac4bc
StuartWheater and others added 28 commits November 4, 2025 12:57
@StuartWheater
Merge branch 'v6.3.5-dev' of github.com:StuartWheater/dsBase into v6.…
e80c23f 
…3.5-dev
@StuartWheater
Updated 'mdPatternDS' tests
da36ab8
@StuartWheater
Merge pull request datashield#441 from StuartWheater/v6.3.5-dev
40e6425 
Improved 'mdPatternDS' tests
@StuartWheater
Fix version
9b0fec1
@StuartWheater
Update to docs
2a3b3fe
@villegar
Remove nightly scheduled run and update call to parse_test_report.R
81f5f64
@villegar
Add session_info_*.txt as one of the log outputs and avoid storing du…
e0d234f 
…plicated HTML reports
@StuartWheater
Merge of changes made to 'v6.3.5-dev'
b2231ee
@StuartWheater
Update 'perf' support
42efdb6
@StuartWheater
Merge branch 'v6.3.5-dev' of github.com:StuartWheater/dsBase into v6.…
7c138f8 
…3.5-dev
@StuartWheater
Merge pull request datashield#446 from StuartWheater/v6.3.5-dev
27e5a1f 
Fix of version and update of 'perf' record management
@StuartWheater
Minor docs update
998482c
@StuartWheater
Merge branch 'v6.3.5-dev' of github.com:StuartWheater/dsBase into v6.…
b335757 
…3.5-dev
@StuartWheater
Merge pull request datashield#447 from StuartWheater/v6.3.5-dev
5ae71ec 
Minor docs update
@StuartWheater
Reworking of performance profiles
bcfb6ae
@StuartWheater
Merge branch 'v6.3.5-dev' of github.com:StuartWheater/dsBase into v6.…
5af03c3 
…3.5-dev
@StuartWheater
Rework setting of variable
2b201d6
@StuartWheater
Merge pull request datashield#449 from StuartWheater/v6.3.5-dev
079a067 
Reworking of performance profiles
@StuartWheater
Fixed Type
9e3892d
@StuartWheater
Merge branch 'datashield:v6.3.5-dev' into v6.3.5-dev
ee8d845
@StuartWheater
Merge pull request datashield#450 from StuartWheater/v6.3.5-dev
e21530a 
Fix "=" to "<-" typo
@StuartWheater
Merge branch 'datashield:v6.4.0-dev' into v6.4.0-dev
e672990
@StuartWheater
Update test schedual
56ee2f1
@StuartWheater
Merge branch 'v6.3.5-dev' of github.com:StuartWheater/dsBase into v6.…
8665845 
…3.5-dev
@StuartWheater
Update test schedual
05c8de2 
Rework of schedules test runs
@StuartWheater
Update with CRAN changes in v6.3.5
85f78cf
@StuartWheater
Updates needed to pass 'devtools'
0db81a0
@StuartWheater
Further issue fixes
8bd45f9
@codecov-commenter
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codecov-commenter commented Feb 10, 2026

⚠️ Please install the 'codecov app svg image' to ensure uploads and comments are reliably processed by Codecov.

Codecov Report

❌ Patch coverage is 33.97436% with 103 lines in your changes missing coverage. Please review.
⚠️ Please upload report for BASE (v6.4.0-dev@e7bd556). Learn more about missing BASE report.

Files with missing lines Patch % Lines
R/subsetDS.R 0.00% 53 Missing ⚠️
R/subsetByClassDS.R 0.00% 23 Missing ⚠️
R/blackBoxDS.R 0.00% 4 Missing ⚠️
R/blackBoxRanksDS.R 0.00% 4 Missing ⚠️
R/heatmapPlotDS.R 0.00% 4 Missing ⚠️
R/histogramDS1.R 0.00% 4 Missing ⚠️
R/histogramDS2.R 0.00% 4 Missing ⚠️
R/scatterPlotDS.R 0.00% 4 Missing ⚠️
R/minMaxRandDS.R 75.00% 1 Missing ⚠️
R/rangeDS.R 75.00% 1 Missing ⚠️
... and 1 more
❗ Your organization needs to install the Codecov GitHub app to enable full functionality.
Additional details and impacted files 
@@              Coverage Diff              @@
##             v6.4.0-dev     #445   +/-   ##
=============================================
  Coverage              ?   29.33%           
=============================================
  Files                 ?      138           
  Lines                 ?     5709           
  Branches              ?        0           
=============================================
  Hits                  ?     1675           
  Misses                ?     4034           
  Partials              ?        0

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:
  • ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

@StuartWheater StuartWheater merged commit 5205ed8 into datashield:v6.4.0-dev Feb 10, 2026
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@StuartWheater @codecov-commenter @villegar @OllyButters @ESCRI11