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@pharmbio

pharmb.io

Pharmaceutical Bioinformatics research group at Uppsala University

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  1. sciluigi sciluigi Public

    A light-weight wrapper library around Spotify's Luigi workflow library to make writing scientific workflows more fluent, flexible and modular

    Python 335 55

  2. bioimg-sciluigi-casestudy bioimg-sciluigi-casestudy Public

    An automated virtual machine setup, containing a use case for running workflows written in SciLuigi

    Python 5 1

  3. robotlab robotlab Public

    Cell painting and imaging with robots

    Python 13 1

  4. plaid plaid Public

    PLAID (Plate Layouts using Artificial Intelligence Design) is a flexible constraint-programming model representing the Plate Layout Design problem.

    Jupyter Notebook 17 5

  5. squid squid Public

    Forked from Cephla-Lab/Squid

    C 3

Repositories

Showing 10 of 119 repositories
  • cppipeline2 Public

    version 2 of cppipeline

    pharmbio/cppipeline2’s past year of commit activity
    Python 0 0 0 0 Updated Feb 12, 2026
  • repuragent-web Public

    Web application version of Repuragent - AI Agent for Drug Repurposing

    pharmbio/repuragent-web’s past year of commit activity
    Python 0 0 0 0 Updated Feb 12, 2026
  • robotlab Public

    Cell painting and imaging with robots

    pharmbio/robotlab’s past year of commit activity
    Python 13 MIT 1 4 0 Updated Feb 11, 2026
  • cp_pipeline Public
    pharmbio/cp_pipeline’s past year of commit activity
    Python 0 0 0 0 Updated Feb 10, 2026
  • imagedb Public

    Image database for pharmbio microscope images

    pharmbio/imagedb’s past year of commit activity
    JavaScript 5 0 9 3 Updated Feb 9, 2026
  • pharmbio-web Public

    The Static (Hugo) website for pharmb.io

    pharmbio/pharmbio-web’s past year of commit activity
    JavaScript 3 7 0 5 Updated Jan 28, 2026
  • repuragent Public

    Multi-agentic AI system for Drug Repurposing

    pharmbio/repuragent’s past year of commit activity
    Jupyter Notebook 16 0 0 0 Updated Jan 27, 2026
  • pipelinegui Public
    pharmbio/pipelinegui’s past year of commit activity
    JavaScript 0 0 1 0 Updated Jan 20, 2026
  • squid Public Forked from Cephla-Lab/Squid
    pharmbio/squid’s past year of commit activity
    C 3 49 6 0 Updated Jan 20, 2026
  • pharmbio/cage2_automation’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 19, 2026

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